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HMSCP - Shotgun community profiling

Reads generated by Illumina wgs sequencing were mapped on to a database of reference genomes in order to calculate organism abundance.

For each sample, we provide three files:

• - A tab delimited abundance table, indicating depth and breath of mapping to each reference
• - A metrics file, summarizing the number of reads mapped versus the number that aligned to a reference
• - Mapping alignment files in bam format

• Data Table
• Protocols and Tools
• Related Pages