HMSCP

Reads generated by Illumina wgs sequencing were mapped on to a database of reference genomes in order to calculate organism abundance.

For each sample, we provide three files:

• A tab delimited abundance table, indicating depth and breath of mapping to each reference
• A metrics file, summarizing the number of reads mapped versus the number that aligned to a reference
• Mapping alignment files in bam format

• Data Table
• Protocols and Tools
• Related Pages